A Galaxy-based framework consisting of publicly available research software and specifically designed pipelines to build complex, reproducible workflows for next-generation sequencing microbiology data analysis. Enabling microbiology researchers to conduct their own custom analysis and data manipulation without software installation or programming, Orione provides new opportunities for data-intensive computational analyses in microbiology and metagenomics.
- Software type:
- Pipeline
- Interface:
- Web user interface
- Restrictions to use:
- None
- Computer skills:
- Basic
- Stability:
- Stable
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Fantastic ! Great Tool
Fantastic ! Great Tool
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Maintainer
- Gianmauro Cuccuru <gianmauro.cuccuru at crs4.it>
Institution(s)
CRS4, Science and Technology Park Polaris, Piscina Manna, 09010 Pula (CA), Italy
Funding source(s)
This work was partially supported by the Sardinian Regional Authorities and the Wellcome Trust (095931).
-
(Cuccuru et al., 2014) Orione, a web-based framework for NGS analysis in microbiology. Bioinformatics.
PMID: 24618473
- Archaebacteria
- Eubacteria