OrtholugeDB specifications
Information
Unique identifier | OMICS_05345 |
---|---|
Name | OrtholugeDB |
Restrictions to use | None |
Maintained | Yes |
Publication for OrtholugeDB
OrtholugeDB: a bacterial and archaeal orthology resource for improved comparative genomic analysis
OrtholugeDB citations
(2)A Novel Calcium Uptake Transporter of Uncharacterized P Type ATPase Family Supplies Calcium for Cell Surface Integrity in Mycobacterium smegmatis
[…] Orthologs were predicted with OrtholugeDB () or by reciprocal best-hits method (). Multiple sequence alignments of the CtpE sequence from M. smegmatis and orthologous sequences from other species was done by ClustalW, and a phylog […]
Comparative Genomics and Transcriptional Analysis of Flavobacterium columnare Strain ATCC 49512
[…] i and genomic rearrangements (Darling et al., ). PSORTdb (http://db.psort.org) version 3.0 was used to predict protein localization (Rey et al., ; Yu et al., ). Orthology analysis was conducted using OrtholugeDB (Whiteside et al., ) and Rast annotation server (Aziz et al., ; Overbeek et al., ).EDGAR was used to determine phylogenetic relationships between the Flavobacterium genomes and to calculat […]
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