OsiriX statistics

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Citations per year

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Popular tool citations

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Tool usage distribution map

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Associated diseases

Associated diseases


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OsiriX specifications


Unique identifier OMICS_26089
Name OsiriX
Software type Application/Script
Interface Graphical user interface
Restrictions to use License purchase required
Operating system Mac OS
License Commercial
Computer skills Medium
Version 9.0
Stability Stable
Free trial Yes
Registration required Yes


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OsiriX in pipelines

PMCID: 5345771
PMID: 28357042
DOI: 10.5256/f1000research.10632.r18886

[…] ( ). the cc was traced on the mid-sagittal slice and five adjacent slices in each hemisphere using open source invesalius 3 ( http://www.cti.gov.br/invesalius/, rrid: scr_014693). alternatively, osirix 8.0.1 software ( http://www.osirix-viewer.com/, rrid: scr_013618) may also be used. in some cases, data is obtained as a nifti-1file with the extension .nii; these files may also be used. […]

PMCID: 5740223
PMID: 29285347
DOI: 10.1098/rsfs.2017.0021

[…] and manual tools [,] including both commercial and open source software: mimics (materialise, belgium), simpleware scanip (synopsis, uk), vmtklab (orobix, italy), itk-snap (www.itksnap.org []) and osirix (pixmeo, switzerland). three-dimensional anatomical volumes of the blood pool were created from the 3d whole-heart mr sequences and from ct in order to represent the region of interest […]

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OsiriX in publications

PMCID: 5949285
PMID: 29756411
DOI: 10.14814/phy2.13699

[…] base. late gadolinium enhancement (lge) images in the slice locations described above were acquired 10–15 min after iv gd‐dtpa and assessed for lge., mri images, in dicom format, were processed with osirix (rosset et al. ) software. the end‐diastolic and end systolic phases were identified on a slice‐by‐slice basis and both the endocardial and epicardial borders were traced. the lv end systolic […]

PMCID: 5954786
PMID: 29782606
DOI: 10.1186/s41824-018-0027-1

[…] and/or clinical follow-up is needed in order to calculate accuracy diagnostic values., image analysis was performed using a general electric aw 4.6 platform (hp workstation and linux os) and osirix v6.5.2 (os x el capitan)., tumour to background ratio signal from the same lesions in both 68ga-psma and 11c-choline studies were analysed using the student paired t-test. comparisons […]

PMCID: 5938809
PMID: 29734942
DOI: 10.1186/s12891-018-2059-x

[…] mris at the mid l4 vertebrae to standardize lumbar spine level across patients []., regions of interest (rois) for both the multifidus and erector spinae muscles were segmented bilaterally using osirix software []. two methods of identifying the posterior boundary of the regions of interest were used:method 1 – muscle roi definitions were based on fascial plane separation using the facet […]

PMCID: 5932032
PMID: 29720622
DOI: 10.1038/s41598-018-25307-w

[…] (aif), another roi was drawn in one of the iliac arteries (common or external) or femoral superficial artery visible (see fig. ) depending on the specific tumour position within the rectum using the osirix dicom viewer (pixmeo, geneva, switzerland). perfusion parameters were calculated employing the fast deconvolution algorithm using an in-house developed established perfusion plugin tool […]

PMCID: 5938053
PMID: 29700279
DOI: 10.1038/s12276-018-0080-7

[…] photoacoustic signals generated by a given laser pulse in a target at a 5-mm depth and 680-nm wavelength in a phantom were detected by all transducers. data were reconstructed and drawn in osirix after exporting the raw data in dicom format (pixmeo, switzerland). the experiments were performed three times with triplicate wells., adult sd rats (male, 160–200 g) were anesthetized […]

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