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- Computer skills:
- minfi, parallel, doParallel, Biobase (>= 2.17.8), foreach
- Command line interface
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- Unix/Linux, Mac OS, Windows
- Artistic License version 2.0
(Xu et al., 2016) oxBS-MLE: an efficient method to estimate 5-methylcytosine and 5-hydroxymethylcytosine in paired bisulfite and oxidative bisulfite treated DNA. Bioinformatics.
- Liang Niu <niulg at ucmail.uc.edu>
oxBS-MLE is implemented in Bioconductor package ENmix.
Epidemiology Branch, National Institute of Environmental Health Sciences, NIH, Research Triangle Park, NC, USA; Epigenetic and Stem Cell Biology Laboratory, National Institute of Environmental Health Sciences, NIH, Research Triangle Park, NC, USA; Department of Environmental Health, College of Medicine, University of Cincinnati, Cincinnati, OH, USA
This research was supported by the Center for Environmental Genetics grant (NIEHS award P30ES00606), NIEHS grant ES022071, and Intramural Research Program of the NIH (NIEHS Z01 ES049033, and Z01 ES049032).
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