P-Match specifications

Unique identifier:
OMICS_18433
Restrictions to use:
None
Input format:
TRANSFAC, FASTA EMBL
Computer skills:
Basic
Maintained:
Yes
Interface:
Web user interface
Input data:
A library of weight matrices, a profile file containing a set of matrix accession numbers, a DNA sequence file.
Programming languages:
C++, Perl
Stability:
Stable

P-Match specifications

Unique identifier:
OMICS_18433
Interface:
Command line interface
Input data:
A library of weight matrices, a profile file containing a set of matrix accession numbers, a DNA sequence file.
Operating system:
Unix/Linux, Windows
Computer skills:
Advanced
Maintained:
Yes
Software type:
Package/Module
Restrictions to use:
None
Input format:
TRANSFAC, FASTA EMBL
Programming languages:
C++, Perl
Stability:
Stable

versioning

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P-Match support

Maintainer

  • Kel AE <>
  • Kel AE <>

Additional information

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Publications

Institution(s)

BIOBASE GmbH, Wolfenbuttel, Germany

Funding source(s)

Supported by a grant of the European Commission (Projects: Intergenomics, COMBIO, INTAS:N.03-51- 5218, TRANSISTOR), and by grant BioProfile Braunschweig/ Gottingen/Hannover (0 313 092).

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