P_RNA_scaffolder specifications


Unique identifier OMICS_27432
Name P_RNA_scaffolder
Software type Application/Script
Interface Command line interface
Restrictions to use None
Input format SAM
Output format FASTA
Biological technology Illumina
Operating system Unix/Linux
Programming languages C++, Perl, Shell (Bash)
Computer skills Advanced
Stability Stable
Maintained Yes


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  • person_outline Jiong-Tang Li <>

Additional information


Publication for P_RNA_scaffolder

P_RNA_scaffolder institution(s)
Key Laboratory of Aquatic Genomics, Ministry of Agriculture, CAFS Key Laboratory of Aquatic Genomics and Beijing Key Laboratory of Fishery Biotechnology, Chinese Academy of Fishery Sciences, Beijing, China; College of Fisheries and Life Science, Shanghai Ocean University, Shanghai, China; College of Marine Science, Zhejiang Ocean University, Zhoushan, China
P_RNA_scaffolder funding source(s)
Supported by the National Natural Science Foundation of China (31402353 and 31672644) and the Special Scientific Research Funds for Central Non-profit Institutes, Chinese Academy of Fishery Sciences (2014C010).

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