PAD specifications

Information


Unique identifier OMICS_15936
Name PAD
Alternative name Proximal And Distal
Interface Web user interface
Restrictions to use None
Programming languages Javascript, Python
License GNU General Public License version 3.0
Computer skills Basic
Stability Stable
Maintained Yes

Maintainer


  • person_outline Pengyi Yang

Information


Unique identifier OMICS_15936
Name PAD
Alternative name Proximal And Distal
Software type Package/Module
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux
Programming languages Python
License GNU General Public License version 3.0
Computer skills Advanced
Stability Stable
Requirements
MySQL, MySQL-python, Django, django-crispy-forms, Django-multiupload, numpy, plotly, pybedtools, bedtools, scipy
Maintained Yes

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Versioning


No version available

Maintainer


  • person_outline Pengyi Yang

Publication for Proximal And Distal

PAD citations

 (2)
library_books

High‐throughput sequencing revealed a novel SETX mutation in a Hungarian patient with amyotrophic lateral sclerosis

2017
PMCID: 5390843
PMID: 28413711
DOI: 10.1002/brb3.669

[…] neurons in the spinal cord and diminished number of axons in the ventral roots. Hyaline inclusions were noted in the remaining spinal motor neurons. Histological examination of the striated muscles (proximal and distal in the extremities, in the diaphragm and in the tongue) revealed signs of neurogenic atrophy. There were no signs of degeneration in the corticospinal tracts. The motor cortex rema […]

library_books

Combined analysis of DNA methylome and transcriptome reveal novel candidate genes with susceptibility to bovine Staphylococcus aureus subclinical mastitis

2016
Sci Rep
PMCID: 4944166
PMID: 27411928
DOI: 10.1038/srep29390

[…] y, the numbers of enriched methylation peaks around the TSS in cows with S. aureus subclinical mastitis were moderately higher compared with those in healthy cows (). Moreover, DNA methylation of the proximal and distal promoter regions of HCP and ICP in cows with S. aureus subclinical mastitis was higher than that in control cows. Taken together, these results suggest that promoter hypermethylati […]

PAD funding source(s)
Supported in part by funds from University of Sydney, the New South Wales Ministry of Health, the Human Frontier Science Program (RGY0084/2014), National Health and Medical Research Council (1105271), National Heart Foundation, the Amazon Web Service Cloud Credits for Research Program.

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