PALMapper specifications

Information


Unique identifier OMICS_01245
Software type Package/Module
Interface Command line interface
Restrictions to use None
Input data A genome sequence, a read data to align and an optional genome annotation file, donor and acceptor splice-site predictions and a QPALMA parameter file.
Input format FASTA+FASTQ/GFF3+SPF
Operating system Unix/Linux, Mac OS
Database management system MySQL
Computer skills Advanced
Version 0.5
Stability Stable
Maintained Yes

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Maintainer


  • person_outline Gunnar Rätsch <>

Additional information


http://www.raetschlab.org/suppl/palmapper/tutorial

PALMapper article

PALMapper institution(s)
Friedrich Miescher Laboratory, Max Planck Society, Tübingen, Germany
PALMapper funding source(s)
Supported by the Max Planck Society, the EU under the PASCAL2 Network of Excellence (ICT-216886), and DFG Grant RA1894/1-1.

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