PaperBLAST statistics

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Citations per year

Number of citations per year for the bioinformatics software tool PaperBLAST

Tool usage distribution map

This map represents all the scientific publications referring to PaperBLAST per scientific context
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PaperBLAST specifications


Unique identifier OMICS_18182
Name PaperBLAST
Interface Web user interface
Restrictions to use None
Input data Some protein sequences.
Input format FASTA, Uniprot
Programming languages Perl
License GNU General Public License version 3.0
Computer skills Basic
Stability Stable
Maintained Yes




  • person_outline Morgan Price

Publication for PaperBLAST

PaperBLAST citation


Comparative Genomics Reveals the Regulatory Complexity of Bifidobacterial Arabinose and Arabino Oligosaccharide Utilization

Front Microbiol
PMCID: 5928203
PMID: 29740413
DOI: 10.3389/fmicb.2018.00776

[…] ED genomic platform (). For functional gene annotation and building of the arabinose/AOS catabolic subsystem in SEED we combined existing annotations with information from literature accessed via the PaperBLAST tool () and reference databases including SwissProt for characterized protein annotations (), KEGG for reference metabolic pathways (), TCDB for transporter classification () and CAZy for c […]

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PaperBLAST institution(s)
Environmental Genomics & System Biology, Lawrence Berkeley National Lab, Berkeley, CA, USA
PaperBLAST funding source(s)
Supported by ENIGMA - Ecosystems and Networks Integrated with Genes and Molecular Assemblies, and the U.S. Department of Energy, Office of Science, Office of Biological & Environmental Research under contract number DE-AC02-05CH11231.

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