PATH2PPI statistics

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Citations per year

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Associated diseases

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PATH2PPI specifications

Information


Unique identifier OMICS_11008
Name PATH2PPI
Software type Package/Module
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux, Mac OS, Windows
Programming languages R
License GNU General Public License version 3.0
Computer skills Advanced
Version 1.10.0
Stability Stable
Requirements
methods, BiocGenerics, BiocStyle, RUnit, rmarkdown, knitr, R(>=3.2.1), igraph(>=1.0.1)
Maintained Yes

Versioning


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Documentation


Maintainer


  • person_outline Ina Koch <>

Publication for PATH2PPI

PATH2PPI in publication

PMCID: 5369006
PMID: 28347269
DOI: 10.1186/s12859-017-1603-2

[…] interactions for p. anserina but with a very limited possibility to track the source of the provided interactions., to overcome this incompleteness of ppi data, we applied the software tool path2ppi [] to predict the ppi network of autophagy in p. anserina based on information about autophagy from the two reference systems yeast and human. additionally, we performed a yeast two-hybrid […]


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PATH2PPI institution(s)
Molecular Developmental Biology, Institute of Molecular Biosciences, Faculty for Biosciences & Cluster of Excellence ‘Macromolecular Complexes’, Johann Wolfgang Goethe University, Frankfurt am Main, Germany; Molecular Bioinformatics, Institute of Computer Science, Faculty of Computer Science and Mathematics & Cluster of Excellence ‘Macromolecular Complexes’, Johann Wolfgang Goethe University, Frankfurt am Main, Germany

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