PATH2PPI statistics

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Citations per year

Number of citations per year for the bioinformatics software tool PATH2PPI

Tool usage distribution map

This map represents all the scientific publications referring to PATH2PPI per scientific context
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Associated diseases


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PATH2PPI specifications


Unique identifier OMICS_11008
Software type Package/Module
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux, Mac OS, Windows
Programming languages R
License GNU General Public License version 3.0
Computer skills Advanced
Version 1.10.0
Stability Stable
methods, BiocGenerics, BiocStyle, RUnit, rmarkdown, knitr, R(>=3.2.1), igraph(>=1.0.1)
Maintained Yes


No version available



  • person_outline Ina Koch

Publication for PATH2PPI

PATH2PPI citation


The autophagy interaction network of the aging model Podospora anserina

BMC Bioinformatics
PMCID: 5369006
PMID: 28347269
DOI: 10.1186/s12859-017-1603-2

[…] We applied the software package PATH2PPI [] which requires three data sets for both reference species. First, PATH2PPI requires the proteins which are associated with autophagy in the corresponding species. In the UniProt database, […]

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PATH2PPI institution(s)
Molecular Developmental Biology, Institute of Molecular Biosciences, Faculty for Biosciences & Cluster of Excellence ‘Macromolecular Complexes’, Johann Wolfgang Goethe University, Frankfurt am Main, Germany; Molecular Bioinformatics, Institute of Computer Science, Faculty of Computer Science and Mathematics & Cluster of Excellence ‘Macromolecular Complexes’, Johann Wolfgang Goethe University, Frankfurt am Main, Germany

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