×
Create your own tool library
Bookmark tools and put favorites into folders to find them easily.

PATHiWAYS

Online

A web tool for the interpretation of the consequences of the combined changes in expression levels of genes in the context of signaling pathways. Specifically, this tool allows the user to identify the stimulus-response subpathways that are significantly activated or deactivated in the typical case/control experiment. PATHiWAYS identifies all the stimulus-response subpathways of KEGG signaling pathways, calculates the probability of activation of each one, based on the individual gene expression values and identifies those with a significant differential activity between the two conditions compared.

User report

×
Vote up tools and offer feedback
Give value to tools and make your expertise visible

0 user reviews

0 user reviews

No review has been posted.

PATHiWAYS forum

×
Communicate with other users
Participate in the forum to get support for using tools. Ask questions about technical specifications.

No open topic.

PATHiWAYS classification

  • Animals
    • Homo sapiens
    • Mus musculus

PATHiWAYS specifications

Interface:
Web user interface
Input data:
Gene expression
Programming languages:
Java, Javascript
Computer skills:
Basic
Maintained:
Yes
Restrictions to use:
None
Output data:
Pathway activity
License:
GNU General Public License version 2.0
Stability:
Stable

Credits

×
Promote your skills
Define all the tasks you managed and assign your profile the appropriate badges. Become an active member.

Publications

Institution(s)

Computational Genomics Department, CIPF, Valencia, Spain

Link to literature

By using OMICtools you acknowledge that you have read and accepted the terms of the end user license agreement.