Permits interactive visualization that shows time series data for both gene activity and metabolite levels over multiple pathways and multiple species. Pathline supports the visual analysis of all four kinds of data (functional genomics data across multiple pathways, multiple genes and metabolites, and multiple species) and three kinds of task levels. It provides linearized pathways view that allows an overview of multiple aggregate similarity scores for each gene across multiple pathways.
Harvard University, USA; Broad Institute, USA; Georgia Institute of Technology, USA; University of British Columbia, Canada
Pathline funding source(s)
This work was supported by the Data Visualization Initiative at the Broad Institute, and by the National Science Foundation under Grant 0937060 to the Computing Research Association for the CIFellows Project.