PathVar specifications

Information


Unique identifier OMICS_19206
Name PathVar
Interface Web user interface
Restrictions to use None
Input data A pre-normalized, tab-delimited microarray dataset.
Computer skills Basic
Stability Stable
Maintained Yes

Maintainer


  • person_outline enrico.glaab

Additional information


http://pathvar.embl.de/pathvar/tutorial.html?SESSION_NAME=SESS5954f4b95834b#start

Publication for PathVar

PathVar citation

library_books

pathVar: a new method for pathway based interpretation of gene expression variability

2017
PeerJ
PMCID: 5444375
PMID: 28560097
DOI: 10.7717/peerj.3334

[…] Examples using stem cells illustrate how pathVar works in practice; however, the method can be applied to virtually any gene expression dataset. To highlight the generalizability of pathVar, we selected ten other datasets that cover a variet […]

PathVar institution(s)
Structural and Computational Biology Unit, EMBL, Heidelberg, Luxembourg; Luxembourg Centre for Systems Biomedicine (LCSB), University of Luxembourg, Luxembourg
PathVar funding source(s)
Supported German Academic Exchange Service (DAAD) short-term fellowship.

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