Main logo
tutorial arrow
Create your own tool library
Bookmark tools and put favorites into folders to find them easily.


It is the most advanced standalone pathway analysis application available. Similar to iPathwayGuide, it also considers the size, role, and position of each gene on the pathway as it models high-throughput sequencing data. PathwayGuide offers expert level users the ability to model a wide variety of data, from over 13 organisms. PathwayGuide allows for modeling against KEGG or Reactome Pathways with a broader array of analysis engines.

User report

tutorial arrow
Vote up tools and offer feedback
Give value to tools and make your expertise visible
Give your feedback on this tool
Sign up for free to join and share with the community

0 user reviews

0 user reviews

No review has been posted.

PathwayGuide forum

tutorial arrow
Communicate with other users
Participate in the forum to get support for using tools. Ask questions about technical specifications.
Take part in the discussion
Sign up for free to ask question and share your advices

No open topic.

PathwayGuide classification

PathwayGuide specifications

Software type:
Restrictions to use:
License purchase required
Command line interface
Operating system:
Computer skills:

PathwayGuide distribution


tutorial arrow
Upload and version your source code
Get a DOI for each update to improve tool traceability. Archive your releases so the community can easily visualize progress on your work.
Facilitate your tool traceability
Sign up for free to upload your code and get a DOI

No versioning.

PathwayGuide support


This tool is not available anymore.

Link to literature

By using OMICtools you acknowledge that you have read and accepted the terms of the end user license agreement.