PathwayMapper statistics

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Citations per year

Citations chart

Popular tool citations

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Popular tools chart

Tool usage distribution map

Tool usage distribution map

Associated diseases

Associated diseases

PathwayMapper specifications


Unique identifier OMICS_17292
Name PathwayMapper
Interface Web user interface
Restrictions to use None
Output format JPEG, PNG, SVG
License GNU Affero General Public License version 3
Computer skills Basic
Version 1.1
Stability Stable
Maintained Yes




  • person_outline Ugur Dogrusozt <>
  • person_outline PathwayMapper Team <>

Publication for PathwayMapper

PathwayMapper in publication

PMCID: 5918694
PMID: 29617658
DOI: 10.1016/j.celrep.2018.03.046

[…] (). we processed data using a combination of pandas (version 0.20.3) and dplyr (version 0.7.1) and visualized results using a combination of seaborn (version 0.7.1), ggplot2 (version 2.2.1), and pathwaymapper (). r packages were run on r version 3.4.0. please refer to the and the available github repository ( for full software version details. […]

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PathwayMapper institution(s)
Computer Engineering Department, Bilkent University, Ankara, Turkey; Tri-Institutional Program in Computational Biology and Medicine, New York City, NY, USA; Biomedical Engineering Department, OHSU, Portland, OR, USA; Marie-Josée and Henry R. Kravis Center for Molecular Oncology, New York, NY, USA; Department of Epidemiology and Biostatistics, Memorial Sloan Kettering Cancer Center, New York, NY, USA
PathwayMapper funding source(s)
Supported by the Marie-Josée and Henry R. Kravis Center for Molecular Oncology, a National Cancer Institute Cancer Center Core Grant (P30-CA008748), the Robertson Foundation, and the Prostate Cancer Foundation.

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