PathWhiz specifications


Unique identifier OMICS_08276
Name PathWhiz
Interface Web user interface
Restrictions to use None
Computer skills Basic
Version 1.0
Stability Stable
Registration required Yes
Maintained Yes


  • person_outline David Wishart

Publication for PathWhiz


Pathways with PathWhiz

2015 Nucleic Acids Res
PMCID: 4489271
PMID: 25934797
DOI: 10.1093/nar/gkv399

PathWhiz citations


From chromatogram to analyte to metabolite. How to pick horses for courses from the massive web resources for mass spectral plant metabolomics

PMCID: 5499862
PMID: 28520864
DOI: 10.1093/gigascience/gix037

[…] some kind of statistical analysis such as pathway enrichment and correlation analysis.Visualization tools provide a simple means of representing and mapping metabolic changes in tools like PATHOS [], PathWhiz [], and Interactive Pathways Explorer (iPath) []. They can often provide some kind of pathway structure analysis such as PathVisio [], Functional Enrichment Analysis Tool (FunRich) [], BiNChE […]


Cancer Metabolomics and the Human Metabolome Database

PMCID: 4812339
PMID: 26950159
DOI: 10.3390/metabo6010010

[…] the HMDB is fully searchable (via PathSearch) and each pathway has a short synoptic description. All of the pathway maps in the HMDB (and SMPDB) have been created using an online drawing tool called PathWhiz []. As a web server, PathWhiz is accessible from almost any place and compatible with essentially any operating system. It also houses a public library of more than 1700 pathways and thousand […]

PathWhiz institution(s)
Department of Computing Science, University of Alberta, Edmonton, AB, Canada
PathWhiz funding source(s)
This work was supported by Alberta Innovates BioSolutions [2012Q009R], Alberta Innovates Health Solutions [201201143], The Canadian Institutes for Health Research (CIHR) [111062], and Genome Canada [MC2].

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