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PATTERNA specifications


Unique identifier OMICS_27475
Software type Application/Script
Interface Command line interface
Restrictions to use None
Input format FASTA
Operating system Unix/Linux
Programming languages Python
License BSD 2-clause “Simplified” License
Computer skills Advanced
Version 1.1.3
Stability Stable
Maintained Yes




No version available


  • person_outline Sharon Aviran

Publication for PATTERNA

PATTERNA citations


A Historical Overview of the Classification, Evolution, and Dispersion of Leishmania Parasites and Sandflies

PLoS Negl Trop Dis
PMCID: 4777430
PMID: 26937644
DOI: 10.1371/journal.pntd.0004349

[…] oew, 1845), and P. khludae (Kaddumi, 2005) [], reported from the Old World, both were discovered in Jordanian fossil amber. Sandflies from Mexican ambers from Chiapas were identified as Micropygomyia patterna (= Lutzomyia paterna [Quate, 1963]) and dated to the Miocene (20 MYA). This species is the first known phlebotomine among the current reptile-feeding species to exhibit narrow wings and to fe […]


Multiple transcripts of anoctamin genes expressed in the mouse submandibular salivary gland

PMCID: 4415004
PMID: 25932341
DOI: 10.5051/jpis.2015.45.2.69

[…] 4, anoctamin5, anoctamin6, anoctamin9, anoctamin10 found in the mouse submandibular gland. Multiple alternatively spliced anoctamin transcripts were also expressed, especially of anoctamin5, but this patterna was also found in anoctamin6, in which case most of the splice variants would likely lead to non-functional proteins. It is intriguing to speculate about the biological roles are performed by […]


Traditional Chinese medicine for stable angina pectoris via TCM pattern differentiation and TCM mechanism: study protocol of a randomized controlled trial

PMCID: 4233055
PMID: 25359307
DOI: 10.1186/1745-6215-15-422

[…] ranule and iodine allergy Glaucoma patients A history of another clinical trial in the previous 2 months No consent form signed Pattern differentiation except for spleen deficiency and phlegm patternA history of chest pain caused by the unstable angina pectoris (UAP), hypertrophic cardiomyopathy (HCM), neurosis, post-menopausal pattern, gastric and esophageal reflux disease (GERD), and so […]


A Review of the Properties and CVD Synthesis of Coiled Carbon Nanotubes

PMCID: 5445847
DOI: 10.3390/ma3042618

[…] sely [].Multi-walled coiled nanotubes with different coil diameter and coil pitch showed no significant differences from the normal multi-walled nanotubes in their Raman spectra and X-ray diffraction patterna []. The Raman spectra indicated that the structures of all these carbon coils were nanocrystalline phases in amorphous networks in spite of the different catalysts and preparation conditions […]


The Structural Dilemma of Bulk Polyethylene: An Intermediary Structure

PLoS One
PMCID: 2705679
PMID: 19597553
DOI: 10.1371/journal.pone.0006228

[…] Two facts are of note:a-Background information about structural determination of polyethylene by the powder methodb-The indexing problem of x-ray powder patterna. Background information about structural determination of polyethylene by the powder method: According to literature the ‘configuration’ of polyethylene chain [CH2]n was curved out from the s […]


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PATTERNA institution(s)
Department of Biomedical Engineering and Genome Center, UC Davis, Davis, CA, USA; Integrative Genetics and Genomics Graduate Group, UC Davis, Davis, CA, USA
PATTERNA funding source(s)
Supported by the National Institutes of Health grant R00-HG006860.

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