PBAP specifications


Unique identifier OMICS_10129
Software type Pipeline/Workflow
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux
Programming languages Perl
Computer skills Advanced
Version 1.0
Stability Stable
Maintained Yes


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  • person_outline Wijsman E.M. <>

Publication for PBAP

PBAP in publications

PMCID: 5065602
PMID: 27535846
DOI: 10.1007/s00439-016-1717-z

[…] .5 % confidence interval from expected. no sample swaps or incorrect parent–offspring relationships were observed within the larger pedigree., from each marker sub-panel created for linkage analysis, pbap prepared data files to generate ivs that described the flow of genetic information through a pedigree for an individual using gl_auto in the morgan suite of programs (thompson ). the gl_auto prog […]

PMCID: 4847873
PMID: 27120335
DOI: 10.1371/journal.pone.0153864

[…] , conifer, http://conifer.sourceforge.net , gemini, http://faculty.washington.edu/wijsman/software.shtml , morgan, https://www.stat.washington.edu/thompson/genepi/morgan/morgan.shtml , pbap (pedigree based analysis pipeline), http://faculty.washington.edu/wijsman/software.shtml , pedstats, http://csg.sph.umich.edu/abecasis/pedstats/download/ , penncnv, […]

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PBAP institution(s)
Division of Medical Genetics, Department of Medicine, University of Washington, Seattle, WA, USA
PBAP funding source(s)
This work was supported by the National Institutes of Health (R01 MH092367, R01 MH094293, R01 AG039700, R37 GM046255, P50 AG005136 and U01 AG016976).

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