PC-TraFF statistics

info info

Citations per year

Number of citations per year for the bioinformatics software tool PC-TraFF

Tool usage distribution map

This map represents all the scientific publications referring to PC-TraFF per scientific context
info info

Associated diseases


Popular tool citations

chevron_left Motif discovery chevron_right
Want to access the full stats & trends on this tool?


PC-TraFF specifications


Unique identifier OMICS_21957
Name PC-TraFF
Alternative names Potentially Collaborating Transcription Factor finder, PC-TraFF_Professional
Interface Web user interface
Restrictions to use None
Input data A sequence set and a PWM library.
Output data A set of significant TFBS pairs.
Computer skills Basic
Stability Stable
Maintained Yes


  • person_outline Mehmet Gultas
  • person_outline Cornelia Meckbach
  • person_outline Edgar Wingender

Additional information

http://pctraffpro.bioinf.med.uni-goettingen.de/newjob.php http://pctraffpro.bioinf.med.uni-goettingen.de/example.php

Publication for Potentially Collaborating Transcription Factor finder

PC-TraFF citation


Computational Detection of Stage Specific Transcription Factor Clusters during Heart Development

Front Genet
PMCID: 4804722
PMID: 27047536
DOI: 10.3389/fgene.2016.00033
call_split See protocol

[…] tations, a RefSeq gene can have multiple overlapping promoter regions which results in overestimation of the importance of some transcription factor binding sites (TFBSs). Thus, following the line of PC-TraFF to remove the redundancy between sequences, we filtered them regarding their TSSs (Meckbach et al., ). Consequently, we used in our analysis only those sequences which have no overlap.In this […]

Want to access the full list of citations?
PC-TraFF institution(s)
Institute of Bioinformatics, University of Göttingen, Göttingen, Germany; Institute of Computer Science, University of Göttingen, Göttingen, Germany

PC-TraFF reviews

star_border star_border star_border star_border star_border
star star star star star

Be the first to review PC-TraFF