PceRBase specifications

Information


Unique identifier OMICS_13133
Name PceRBase
Alternative name Plant ceRNA database
Restrictions to use License purchase required
Community driven No
Data access File download, Browse
User data submission Allowed
Maintained Yes

Maintainer


  • person_outline Ming Chen

Publication for Plant ceRNA database

PceRBase citation

library_books

Bioinformatics resources for deciphering the biogenesis and action pathways of plant small RNAs

2017
PMCID: 5545994
PMID: 28786034
DOI: 10.1186/s12284-017-0177-y

[…] ). Although the online server TAPIR is not superior in sRNA target prediction, it provides a unique functional module for target mimic prediction (Bonnet et al., ). Besides, the recently established PceRBase (plant ceRNA database) stores the lists of the competing endogenous RNAs (similar to the target mimics) of 26 plant species for the users (Yuan et al., ).Finally, researchers could construct […]

PceRBase institution(s)
Department of Bioinformatics, State Key Laboratory of Plant Physiology and Biochemistry, Institute of Plant Science, College of Life Sciences, Zhejiang University, Hangzhou, China; James D. Watson Institute of Genome Sciences, Zhejiang University, Hangzhou, China; Department of Molecular and Cell Biology, University of Cape Town, Rondebosch, South Africa
PceRBase funding source(s)
National Natural Science Foundation of China [31371328, 31571366, 31450110068]; National Key Research and Development Program of China [2016YFA0501704]; Science Technology Department of Zhejiang Province [2015C32057]; Jiangsu Collaborative Innovation Center for Modern Crop Production; Nanjing Agricultural University; National Research foundation of South Africa [CS08-L05]

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