PCM-SABRE specifications

Information


Unique identifier OMICS_15004
Name PCM-SABRE
Alternative name Precision Cancer Medicine - Survival Analysis Benchmarking Reporting and Evaluation
Software type Package/Module
Interface Graphical user interface
Restrictions to use None
Input data The dataset must be a csv file in the form of a table in which the rows represents the patients and the columns represents clinical data, gene expression data or any other types of variables.
Input format CSV
Output data Output includes, for each combination of a feature selection method with a classification algorithm performance measures, ROC analysis and list of ranked features.
Operating system Unix/Linux, Mac OS, Windows
Programming languages R
Computer skills Medium
Stability Stable
Requirements KNIME
Maintained Yes

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Maintainer


  • person_outline Noah Eyal-Altman <>

Publication for Precision Cancer Medicine - Survival Analysis Benchmarking Reporting and Evaluation

PCM-SABRE institution(s)
Shraga Segal Department of Microbiology and Immunology, Faculty of Health Sciences, Ben-Gurion University of the Negev, Beer-Sheva, Israel; Department of Software and Information Systems Engineering, Ben-Gurion University of the Negev, Beer-Sheva, Israel
PCM-SABRE funding source(s)
This research was partially supported by the Paul Ivanier Center for Production Management, Ben-Gurion University of the Negev, and the Israeli Science Foundation (through grant number 1188/16).

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