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PconsD specifications

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Unique identifier OMICS_11948
Name PconsD
Software type Package/Module
Interface Command line interface
Restrictions to use None
Input format PDB
Operating system Unix/Linux
Programming languages Python
Parallelization OpenCL
Computer skills Advanced
Stability No
Requirements
pyOpenCL
Maintained No

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Publication for PconsD

PconsD citation

library_books

An overview of comparative modelling and resources dedicated to large scale modelling of genome sequences

2017
PMCID: 5571743
PMID: 28777078
DOI: 10.1107/S2059798317008920

[…] scores obtained from all pairwise comparisons (model versus model) within the cluster and is usually followed by normalization of the score. recent methods that use clustering approaches include pconsd (skwark & elofsson, 2013), multicom-construct (cao et al., 2014) and modfold6_rank/modfold6_cor (maghrabi & mcguffin, 2017)., model-quality assessment by clustering has typically […]


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PconsD institution(s)
Department of Biochemistry and Biophysics, Science for Life Laboratory, Swedish E-Science Research Center, Stockholm University, Solna, Sweden
PconsD funding source(s)
This work was supported by grants from the Swedish Research Council (VR-NT 2009-5072, VR-M 2010-3555), SSF (the Foundation for Strategic Research) and Vinnova through the Vinnova-JSP program, the EU 7’Th Framework Program by support to the EDICT project, contract No: FP7-HEALTH-F4-2007-201924.

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