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|Alternative name||Protein Corral|
|Interface||Web user interface|
|Restrictions to use||None|
Publication for Protein Corral
Generation of Silver Standard Concept Annotations from Biomedical Texts with Special Relevance to Phenotypes
[…] ubMed  for the retrieval of Gene Ontology (GO) term relevant publications. Moreover, text mining tools can also help with the extraction of potentially relevant facts (information extraction), e.g. Protein Corral  that allows a user to extract protein interactions from abstracts of scientific publications. Some of the information extraction tools support the mapping to database identifiers or […]
Gating the mechanical channel Piezo1
[…] els in the domain. Domain breakage is more likely with large and/or repetitive stimulation.,- The physical domain could be lipids such as a raft, or a more complicated structure such as a caveolus, a protein corral or the patch dome and seal. We can make some crude estimates of the domain size. We often measured patch currents from 50–100 channels so the domain is clearly smaller than the patch an […]
A realistic assessment of methods for extracting gene/protein interactions from free text
[…] bsite. Of the wide range of text mining services on offer, here we focused exclusively on the protein interaction pipeline. (The core pipeline is available separately from Whatizit in the form of the Protein Corral web application . However, Protein Corral is designed to perform Medline searches and does not accept text submitted by the user.) The pipeline begins by mapping gene/protein names to […]
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