PCR software tools

PCR applications

PCR software tools

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G T A T C G C T A Melting curve Single… Melting curve Single nucleotide polymorphism Base…

McSNP Base calling Melting curve Single nucleotide polymorphism Base calling

Comprises a peak detection procedure and an ordinal regression model. McSNP is…

Comprises a peak detection procedure and an ordinal regression model. McSNP is a relatively cheap and handy genotyping technique as it is an extension of the reverse transcription-polymerase chain…

Web app
Desktop app
Multiplex Primer… Multiplex Primer Design

MPD Multiplex Primer Design

Automates the design of multiplex PCR primers for next-generation sequencing.…

Automates the design of multiplex PCR primers for next-generation sequencing. The core of MPD is implemented in C for speed and uses a hashed genome to ensure primer uniqueness, avoids placing…

Web app
Chainy Chainy

Chainy

Provides systematic pipelines and steady criteria to process real-time PCR…

Provides systematic pipelines and steady criteria to process real-time PCR data. Chainy includes the calculation of efficiencies from raw data by kinetic methods, evaluation of the suitability of…

Desktop app
qpcrNorm qpcrNorm

qpcrNorm

Contains functions to perform normalization of high-throughput qPCR data.…

Contains functions to perform normalization of high-throughput qPCR data. qpcrNorm calculates the coefficient of variation for each gene in the qPCR experiment, and returns the average coefficient of…

Most Popular Tools

Web app
RefFinder Deprecated RefFinder

RefFinder

A user-friendly web-based comprehensive tool developed for evaluating and…

A user-friendly web-based comprehensive tool developed for evaluating and screening reference genes from extensive experimental datasets.

Web app
GETPrime GETPrime

GETPrime

A primer database supported by a novel platform that uniquely combines and…

A primer database supported by a novel platform that uniquely combines and automates several features critical for optimal qPCR primer design.

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