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PDB_Hydro specifications


Unique identifier OMICS_15148
Name PDB_Hydro
Interface Web user interface
Restrictions to use None
Input format PDB, MSF
Computer skills Basic
Stability Stable
Maintained Yes


  • person_outline Marc Delarue

Publication for PDB_Hydro

PDB_Hydro citation


Conferring a template dependent polymerase activity to terminal deoxynucleotidyltransferase by mutations in the Loop1 region

Nucleic Acids Res
PMCID: 2724280
PMID: 19502493
DOI: 10.1093/nar/gkp460

[…] that it is essentially disordered. to appreciate the inherent flexibility of this loop we generated dozens of possible loop1 conformations using the knapp algorithm () as implemented in our website pdb_hydro () starting from pol μ structure. they differ widely, mainly because they are completely exposed to the solvent region and there is no real way to distinguish between them (they […]

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PDB_Hydro institution(s)
Unité de Dynamique Structurale des Macromolécules, URA 2185 du C.N.R.S., Institut Pasteur, Paris, France; Computational Structural Biology, Stockholm Bioinformatics Center, Stockholm, Sweden; Computer Science Department and Genome Center, University of California, Davis, CA, USA; Service de Physique Théorique, CE-Saclay, Gif/Yvette, France

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