Optimizes crystallographic structure models. PDB_REDO contains algorithm which allows the setting up of an automated decision making system. This system serves for refinement, rebuilding and validation. The PDB_REDO databank includes protein data bank (PDB) entries with electron density maps, a list of model changes and model validation data. It helps about structural biology project. The protocol of the databank allows to treat the entries to reduce the effects of differences in age, software, and depositors.
Department of Biochemistry, The Netherlands Cancer Institute, Amsterdam, The Netherlands
PDB_REDO funding source(s)
Supported from the Netherlands Organization for Scientific Research (NWO) Vidi grant 723.013.003; by Horizon 2020 programmes WestLife (e-Infrastructure Virtual Research Environment project No. 675858) and iNEXT (project No. 653706).