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Peak calling software tools | CLIP sequencing data analysis

Peak calling software tools | CLIP sequencing data analysis Assessing peaks is a central step of the analysis to determine specific signal over the noise background for the identification of real binding sites. The number of identified peaks increases with the sequencing depth because weaker sites become statistically significant with a greater number of reads. However, the optimal sequencing depth can only be experimentally evaluated, as it depends on the noise background of the antibody.
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