peak-grouping-alignment statistics

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Citations per year

Number of citations per year for the bioinformatics software tool peak-grouping-alignment
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Tool usage distribution map

This map represents all the scientific publications referring to peak-grouping-alignment per scientific context
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Associated diseases

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Popular tool citations

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Protocols

peak-grouping-alignment specifications

Information


Unique identifier OMICS_07461
Name peak-grouping-alignment
Software type Package/Module
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux
Programming languages Python
Computer skills Advanced
Stability Stable
Requirements
Numpy, Scipy, NetworkX, BLAS/OpenBLAS/Atlas
Maintained Yes

Versioning


No version available

Documentation


Maintainer


  • person_outline Simon Rogers

Publication for peak-grouping-alignment

peak-grouping-alignment citations

 (2)
library_books

From chromatogram to analyte to metabolite. How to pick horses for courses from the massive web resources for mass spectral plant metabolomics

2017
GigaScience
PMCID: 5499862
PMID: 28520864
DOI: 10.1093/gigascience/gix037

[…] te kernel density estimation for peak identification. In addition to the tools mentioned above, there are a few tools for data processing that exclusively perform peak detection or alignment, such as peak-grouping alignment [], an approach where information from grouping peaks within samples improves alignment across samples, and parametric time warping [], a fast alignment algorithm based on a va […]

call_split

Using a spike in experiment to evaluate analysis of LC MS data

2012
Proteome Sci
PMCID: 3311572
PMID: 22369182
DOI: 10.1186/1477-5956-10-13
call_split See protocol

[…] We evaluated four software tools: msInspect, MZmine 2, Progenesis LC-MS, and XCMS. All tools perform the common steps including peak detection, peak grouping, alignment, and difference detection. In addition, Progenesis LC-MS allows peptide identification by analysis of tandem MS (MS/MS) data. All tools except XCMS provide solutions to identi […]


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peak-grouping-alignment institution(s)
School of Computing Science, University of Glasgow, UK

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