peakrots statistics

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Citations per year

Citations chart

Popular tool citations

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Popular tools chart

Tool usage distribution map

Tool usage distribution map

Associated diseases

Associated diseases

peakrots specifications


Unique identifier OMICS_00452
Name peakrots
Software type Application/Script
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux
Programming languages R
License GNU General Public License version 3.0
Computer skills Advanced
Version 1.0.1
Stability Stable
Maintained Yes



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Publication for peakrots

peakrots in publications

PMCID: 4022013
PMID: 24555784
DOI: 10.1186/1745-6150-9-4

[…] finding tool that is relevant to the type of research being conducted for maximizing the chance obtaining the best possible peak sequences for finding the motifs. there are software tools such as peakrots [] and the tool presented by schweikert et al. [] that are capable for assisting the users for optimizing the peak calling as well as choosing relevant software package for their analysis. […]

PMCID: 3245948
PMID: 22009681
DOI: 10.1093/nar/gkr839

[…] varying parameter settings. the generic, open-source implementation is easily extendable to accommodate additional features and to promote its widespread application in future chip-seq studies. the peakrots r-package and user guide are freely available at, chromatin immunoprecipitation coupled with deep sequencing (chip-seq) has offered […]

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peakrots institution(s)
CSC-IT Center for Science Ltd, Espoo, Finland

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