peakrots statistics

To access cutting-edge analytics on consensus tools, life science contexts and associated fields, you will need to subscribe to our premium service.

Subscribe
info

Citations per year

Citations chart
info

Popular tool citations

chevron_left Peak calling chevron_right
Popular tools chart
info

Tool usage distribution map

Tool usage distribution map
info

Associated diseases

Associated diseases

peakrots specifications

Information


Unique identifier OMICS_00452
Name peakrots
Software type Application/Script
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux
Programming languages R
License GNU General Public License version 3.0
Computer skills Advanced
Version 1.0.1
Stability Stable
Maintained Yes

Download


Versioning


Add your version

Documentation


Publication for peakrots

peakrots in publications

 (2)
PMCID: 4022013
PMID: 24555784
DOI: 10.1186/1745-6150-9-4

[…] finding tool that is relevant to the type of research being conducted for maximizing the chance obtaining the best possible peak sequences for finding the motifs. there are software tools such as peakrots [] and the tool presented by schweikert et al. [] that are capable for assisting the users for optimizing the peak calling as well as choosing relevant software package for their analysis. […]

PMCID: 3245948
PMID: 22009681
DOI: 10.1093/nar/gkr839

[…] varying parameter settings. the generic, open-source implementation is easily extendable to accommodate additional features and to promote its widespread application in future chip-seq studies. the peakrots r-package and user guide are freely available at http://www.nic.funet.fi/pub/sci/molbio/peakrots., chromatin immunoprecipitation coupled with deep sequencing (chip-seq) has offered […]


To access a full list of publications, you will need to upgrade to our premium service.

peakrots institution(s)
CSC-IT Center for Science Ltd, Espoo, Finland

peakrots reviews

star_border star_border star_border star_border star_border
star star star star star

Be the first to review peakrots