Peakzilla specifications

Unique identifier:
OMICS_00454
Interface:
Command line interface
Input data:
The coordinate files of the mapped reads of the IP and-optionally-control sample.
Output data:
The TFBSs including the genomic positions, raw, distribution and final score, FDR and a peak number according to each peak’s rank.
Operating system:
Unix/Linux, Mac OS
License:
GNU General Public License version 2.0
Stability:
Stable
Software type:
Package/Module
Restrictions to use:
None
Input format:
BED
Output format:
BED
Programming languages:
Python
Computer skills:
Advanced
Maintained:
Yes

versioning

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Peakzilla distribution

download

Peakzilla support

Documentation

Maintainers

  • Alexander Stark <>
  • Jonas Steinmann <>

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Publications

Institution(s)

Research Institute of Molecular Pathology (IMP), Vienna, Austria; Institute of Molecular Biotechnology (IMBA), Vienna, Austria; Stowers Institute for Medical Research, Kansas City, MO, USA

Funding source(s)

Supported by Austrian Ministry for Science and Research through the Genome Research in Austria (GEN-AU) BioinformaticsIntegration Network III; Austrian Research Fund (FWF) (Z_153_B09); NIH New Innovator (1DP2 OD004561-01, a Pew scholar); European Research Council (ERC) Starting Grant from the European Community’s Seventh Framework Programme (FP7/ 2007-2013)/ERC (242922) and Boehringer Ingelheim.

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