PEAS specifications

Information


Unique identifier OMICS_32705
Name PEAS
Alternative name Predict Enhancers from ATAC-seq
Software type Application/Script
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux
Programming languages Python
License MIT License
Computer skills Advanced
Version 1.1
Stability Stable
Requirements
Bash, Java, SAMTools, MACS2, HOMER, numpy, pandas, sklearn, matplotlib
Maintained Yes

Download


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Versioning


No version available

Documentation


Maintainer


  • person_outline Duygu Ucar

Publication for Predict Enhancers from ATAC-seq

PEAS institution(s)
The Jackson Laboratory for Genomic Medicine, Farmington, CT, USA; Department of Genetics and Genome Sciences, University of Connecticut Health Center, Farmington, CT, USA; Institute for Systems Genomics, University of Connecticut Health Center, Farmington, CT, USA
PEAS funding source(s)
Supported by the National Institute of General Medical Sciences (NIGMS) under award number GM124922 and by The Jackson Laboratory startup funds.

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