PEDAL specifications

Information


Unique identifier OMICS_14074
Name PEDAL
Alternative name Promoter-Enhancer Discriminative AnaLysis
Software type Framework/Library
Interface Command line interface
Restrictions to use None
Input data Histone modification markers, chromatin accessibility and binding sites of transcription factors and co-activators
Input format BAM
Operating system Unix/Linux
Programming languages MATLAB
License Other
Computer skills Advanced
Stability Stable
Maintained Yes

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Maintainer


  • person_outline Vladimir Bajic <>

Publication for Promoter-Enhancer Discriminative AnaLysis

PEDAL institution(s)
Computer, Electrical and Mathematical Sciences and Engineering Division, King Abdullah University of Science and Technology, Thuwal, Saudi Arabia; The Institute of Cancer Research, London, UK; RIKEN Center for Life Science Technologies (Division of Genomic Technologies), Yokohama, Kanagawa, Japan; Computational Bioscience Research Center, Computer, Electrical and Mathematical Sciences and Engineering Division, King Abdullah University of Science and Technology, Thuwal, Saudi Arabia
PEDAL funding source(s)
Supported by King Abdullah University of Science and Technology, and Research Grant from MEXT.

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