Protocols

PenBase specifications

Information


Unique identifier OMICS_10925
Name PenBase
Restrictions to use None
Database management system PostgreSQL
Data access Browse
Maintained No

Publication for PenBase

PenBase citation

call_split

A Large Scale Structural Classification of Antimicrobial Peptides

2015
Biomed Res Int
PMCID: 4426897
PMID: 26000295
DOI: 10.1155/2015/475062
call_split See protocol

[…] ADAM contains 7,007 unique AMP sequences extracted from twelve databases (). The twelve databases include APD2 [], AVPpred [], BACTIBASE [], BAGEL3 [], CAMP2 [], DADP [], DAMPD [], HIPdb [], PenBase [], PhytAMP [], RAPD [], and YADAMP []. The AMP sequences in ADAM were mostly derived from natural sources, covering a broad spectrum of species such as archaea, bacteria, plants, and animals. […]

PenBase institution(s)
Ifremer-CNRS-University of Montpellier 2, UMR 5171 Génome Population Interaction Adaptation, Montpellier, France

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