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PepLook specifications

Information


Unique identifier OMICS_10263
Name PepLook
Software type Package/Module
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux
Computer skills Advanced
Stability Stable
Maintained Yes

Versioning


No version available

Maintainer


  • person_outline Annick Thomas

Publications for PepLook

PepLook citations

 (2)
library_books

Peptide Ligand Binding Modeling of siRNA with Cell Penetrating Peptides

2014
Biomed Res Int
PMCID: 4131515
PMID: 25147791
DOI: 10.1155/2014/257040

[…] cell-penetrating peptides in an attempt to classify them according to their permeability []. boltzmannian stochastics have also been used to calculate populations of 3d structures of cpps using peplook, calculating both intra- and intermolecular interactions []. molecular dynamics simulations have also been carried out on penetratin and the tat peptide with lipid bilayers [–], as well […]

library_books

A Long QT Mutation Substitutes Cholesterol for Phosphatidylinositol 4,5 Bisphosphate in KCNQ1 Channel Regulation

2014
PLoS One
PMCID: 3969324
PMID: 24681627
DOI: 10.1371/journal.pone.0093255

[…] smith (university of glasgow, scotland), using stability constants ., 3d models of the wt and mutated sequence fragments, qqarkpydv-r539-dvieqysqg and qqarkpydv-w539-dvieqysqg, were calculated using peplook . briefly, populations of 3d models are built from sequences using a boltzmanian stochastic procedure in which calculated populations are 3d models of lower energy. models are all-atoms […]


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PepLook institution(s)
Centre de Biophysique Moléculaire Numérique (CBMN) FSAGx, Gembloux, Belgium

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