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|Interface||Web user interface|
|Restrictions to use||None|
- person_outline Stefano Moro
Publication for pepMMsMIMIC
Computer aided design of amino acid based therapeutics: a review
[…] macophore- and shape-matching techniques into one program can potentially diminish the rate of false positives.Recently, to discover novel peptidomimetics, a web-oriented virtual screening tool named pepMMsMIMIC was developed to pool the conventional pharmacophore matching with shape complementarity. A library of 17 million conformers were extracted from 3.9 million commercially available chemical […]
Bioinformatic Identification of Peptidomimetic Based Inhibitors against Plasmodium falciparum Antigen AMA1
[…] Virtual screening of peptidomimetics against the crucial residues of PfAMA1 implicated in binding with PfRON2 peptide (residues Pro-2033, Phe-2038 to Arg-2041, and Pro-2044) was carried out with pepMMsMIMIC server . This server is based on multiconformer, three-dimensional (3D) similarity search using as input the 3D structure of a peptide bound to a protein and suggests which chemical stru […]
In Silico Study on Binding Specificity of Gonadotropins and Their Receptors: Design of a Novel and Selective Peptidomimetic for Human Follicle Stimulating Hormone Receptor
[…] The 3D structure of FSHβ peptidic stretch 89S-103Y that includes the BSRs except 42P (as it is topologically distant) was used as the template for pepMMsMIMIC, a web-based peptidomimetic compound virtual screening tool. The pharmacophore model, generated based on the BSRs, was screened against a library of 17 million conformers obtained from 3.9 […]
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