PfamAlyzer statistics

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Citations per year

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Popular tool citations

chevron_left Multiple amino acid sequence alignment Multiple domain alignment chevron_right
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Tool usage distribution map

Tool usage distribution map
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Associated diseases

Associated diseases

PfamAlyzer specifications

Information


Unique identifier OMICS_21642
Name PfamAlyzer
Restrictions to use None
Programming languages Java
Computer skills Basic
Stability No
Maintained No

Maintainer


This tool is not available anymore.

Publication for PfamAlyzer

PfamAlyzer in publication

PMCID: 3548604
PMID: 22408191
DOI: 10.1093/bib/bbs007

[…] will be very different than if the genome were compared to c (two short orfs annotated as two separate intact genes)., predicting domains directly, rather than genes, using tools such as pfamalyzer [], may help in regions with split genes. in the case of eutm/eutn in salmonella, a domain search would identify two intact domains in all cases; however, the question of whether […]


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PfamAlyzer institution(s)
Department of Cell and Molecular Biology, Karolinska Institutet, Stockholm, Sweden; Stockholm Bioinformatics Center, Stockholms Universitet, Stockholm, Sweden

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