PFP specifications

Information


Unique identifier OMICS_21419
Name PFP
Alternative name Protein Function Prediction
Interface Web user interface
Restrictions to use None
Input data A protein sequence.
Input format FASTA
Output data A PFP input sequence and prediction terms for each Gene Ontology category with confidence greater than 5% of the score of the top hit, A downloadable link to the results, a visualization of Predicted GO Terms.
Output format XML
Computer skills Basic
Stability Stable
Maintained Yes

Documentation


Maintainers


  • person_outline Daisuke Kihara <>
  • person_outline Team PFP <>

Additional information


http://kiharalab.org/pfp_tutorial.php

Publications for Protein Function Prediction

PFP institution(s)
Department of Biological Sciences, College of Science, Purdue University, West Lafayette, IN, USA; Department of Computer Science, College of Science, Purdue University, West Lafayette, IN, USA; Markey Center for Structural Biology, College of Science, Purdue University, West Lafayette, IN, USA; Department of Computer Science, Purdue University, IN, USA
PFP funding source(s)
Supported by the National Institutes of Health (R01GM097528) and the National Science Foundation (IIS1319551, DBI1262189, IOS1127027).

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