pGlyco statistics

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Tool usage distribution map

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Associated diseases

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pGlyco specifications

Information


Unique identifier OMICS_19833
Name pGlyco
Software type Pipeline/Workflow
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux
Computer skills Advanced
Stability Stable
Maintained Yes

Versioning


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Maintainers


  • person_outline Si-Min He <>
  • person_outline Catherine Wong <>
  • person_outline Pengyuan Yang <>

Publication for pGlyco

pGlyco in publication

PMCID: 5585273
PMID: 28874712
DOI: 10.1038/s41467-017-00535-2

[…] analyses. here, we propose a workflow for the precise high-throughput identification of intact n-glycopeptides at the proteome scale using stepped-energy fragmentation and a dedicated search engine. pglyco 2.0 conducts comprehensive quality control including false discovery rate evaluation at all three levels of matches to glycans, peptides and glycopeptides, improving the current level […]


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pGlyco institution(s)
Key Lab of Intelligent information Processing of Chinese Academy of Sciences (CAS), Institute of Computing Technology, CAS, Beijing, China; University of Chinese Academy of Sciences, Beijing, China; Institutes of Biomedical Sciences, Fudan University, Shanghai, China; National Center for Protein Science (Shanghai), Institute of Biochemistry and Cell Biology, Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences, Shanghai, China; Thermo Fisher Scientific Co., Ltd, Shanghai, China
pGlyco funding source(s)
Supported by the National Basic Research Program of China (973 grants 2011CB910600, 2013CB911203, 2010CB912701, and 2011CB910604), National Natural Science Foundation of China project (21227805, 31300680), Hi-Tech Research and Development Program of China (863 grants 2014AA020902, 2012AA020203).

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