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Information


Unique identifier OMICS_08092
Name PGP
Alternative name Personal Genome Project
Restrictions to use None
Maintained Yes
Wikipedia https://en.wikipedia.org/wiki/Personal_Genome_Project

Taxon


  • Primates
    • Homo sapiens

Publication for Personal Genome Project

PGP citations

 (12)
library_books

Correcting for Microbial Blooms in Fecal Samples during Room Temperature Shipping

2017
mSystems
PMCID: 5340865
PMID: 28289733
DOI: 10.1128/mSystems.00199-16

[…] led studies. To address this limitation, we compared all AGP fecal samples (~7,000 samples) to data from 3 studies comprised of fecal samples immediately frozen (fresh-frozen) after collection (6, 7; Personal Genome Project [PGP; unpublished data, Qiita study ID 1189]). Importantly, because each study represented a different population, it is likely that sOTUs were present at different frequencies […]

library_books

Genome wide data from two early Neolithic East Asian individuals dating to 7700 years ago

2017
Sci Adv
PMCID: 5287702
PMID: 28164156
DOI: 10.1126/sciadv.1601877

[…] ed with a reference panel containing modern genomes from the HO panel and selected ancient genomes [this data set was described by Jones et al. ()] as well as an additional 45 Korean genomes from the Personal Genome Project Korea (http://opengenome.net/) using PLINK 1.07 (). Additional sample information is available in extended data table S1, including sample IDs, populations, and groupings used […]

library_books

Secure Multi pArty Computation Grid LOgistic REgression (SMAC GLORE)

2016
BMC Med Inform Decis Mak
PMCID: 4959358
PMID: 27454168
DOI: 10.1186/s12911-016-0316-1

[…] trated the possibility to re-identifying individuals from the public query system of the Healthcare Cost and Utilization Project (HCUP) []. Sweeney’s study successfully identified participants of the Personal Genome Project (PGP) []. In addition, with some background information, an attacker can even identify sensitive information of a participant using “anonymized” biomedical data [–]. The study […]

library_books

Extensive sequencing of seven human genomes to characterize benchmark reference materials

2016
Sci Data
PMCID: 4896128
PMID: 27271295
DOI: 10.1038/sdata.2016.25

[…] com/giabpilot). The NIST RM 8398 was prepared by Coriell from a large growth of cells, and the DNA was extracted and mixed to produce about 8300 10 ug vials of DNA. The remaining genomes are from the Personal Genome Project. These genomes are also available as EBV-immortalized B lymphoblastoid cell lines and as extracted DNA from Coriell, and 4 of them will be available as NIST RMs, planned for re […]

library_books

Turning Participatory Microbiome Research into Usable Data: Lessons from the American Gut Project

2016
PMCID: 4798814
PMID: 27047589
DOI: 10.1128/jmbe.v17i1.1034

[…] e contribution of observational data, such as bird sightings or flu symptoms, in projects like Flu Near You (https://flunearyou.org), but may also involve crowdsourced data collection, modeled by the Personal Genome Project (www.personalgenomes.org), or even crowdsourcing data analysis, through platforms like the online games Foldit (https://fold.it/portal/) and EteRNA (http://eterna.cmu.edu/web/) […]

library_books

VariantSpark: population scale clustering of genotype information

2015
BMC Genomics
PMCID: 4676146
PMID: 26651996
DOI: 10.1186/s12864-015-2269-7

[…] We acquired genomic data from the Personal Genome Project (PGP) website (https://my.pgp-hms.org/public_genetic_data). We sort the genotype data from 23andMe microarray platforms by genome build. Using a custom shell script, we convert […]

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PGP institution(s)
Department of Genetics, Harvard Medical School, Boston, MA, USA

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