Main logo
?

Phenomic analysis software tools

A key goal of biology is to understand phenotypic characteristics, such as health, disease and evolutionary fitness. Phenotypic variation is produced through a complex web of interactions between genotype and environment, and such a…

Phenomics applications

Biological Steps

Image databases

Microscopy

Mesoscopy

Macroscopy

Experts in Phenomics

They share and annotate bioinformatics tools

Most recent bioinformatics tools

Bowhead
Desktop

Bowhead

Allows users to detect, fit and predict concerted cell velocity. Bowhead is an…

Allows users to detect, fit and predict concerted cell velocity. Bowhead is an open source program that implements a computational method using a Bayesian statistical approach. The application first…

BOINC
Algorithm

BOINC Barcoding of Individual Neuronal Connectivity

Rebuilds connectivity based on experimental data derived from neuronal…

Rebuilds connectivity based on experimental data derived from neuronal co-culture. BOINC provides a set of computational methods to generate connectivity. The method is composed of three mains steps:…

sbfsem-cardiac-…
Desktop

sbfsem-cardiac-cell-segmenter

Allows users to segment cardiac ultrastructure from serial block-face scanning…

Allows users to segment cardiac ultrastructure from serial block-face scanning electron microscopy (SBF-SEM) data. Sbfsem-cardiac-call-segmenter is a software intended for performing the extraction…

MAPLE Control Software
Desktop

Most popular analytical software and databases

NeurphologyJ
Desktop

NeurphologyJ

A quantification method capable of automatically quantifying neuronal…

A quantification method capable of automatically quantifying neuronal morphologies such as soma number and size, neurite length, and neurite branching complexity (which is highly related to the…

BCT
Desktop

BCT Brain Connectivity Toolbox

A Matlab toolbox for analysis of complex brain networks. The toolbox contains…

A Matlab toolbox for analysis of complex brain networks. The toolbox contains network analysis functions and complex brain network datasets. These measures are increasingly used to characterize…

FlowJo
Desktop

FlowJo

A flow cytometry data analysis software.. FlowJo contains a list of loaded…

A flow cytometry data analysis software.. FlowJo contains a list of loaded samples (experimental data), statistics, gates, and other analyses, as well as tabular and graphical layouts. FlowJo…

Quantinetix
Desktop

Quantinetix

Provides quantitation of target compounds (taking into account biological…

Provides quantitation of target compounds (taking into account biological matrix effect) following Mass spectrometry imaging experiments. Quantinetix is a Quantitative Imaging Mass Spectrometry…

Related Websites
Information

By using OMICtools you acknowledge that you have read and accepted the terms of the end user license agreement.