PhenoPlot specifications


Unique identifier OMICS_22649
Name PhenoPlot
Software type Application/Script
Interface Graphical user interface
Restrictions to use None
Operating system Unix/Linux
Programming languages MATLAB
Computer skills Medium
Stability Stable
Maintained Yes




No version available


  • person_outline Chris Bakal

Publication for PhenoPlot

PhenoPlot citations


Multiparametric Analysis of Cell Shape Demonstrates that β PIX Directly Couples YAP Activation to Extracellular Matrix Adhesion

Cell Syst
PMCID: 5289939
PMID: 28065575
DOI: 10.1016/j.cels.2016.11.015

[…] This strategy identified both known and novel YAP regulators. C shows average cell morphologies and subcellular YAP intensities represented as glyphs (PhenoPlot) (), plotted by the number of cells per well (x axis) and YAPdiff (y axis). LATS1 and LATS2 knockdown cells had high YAPdiff, consistent with their known inhibitory functions (C). Depletion […]


Visualizing quantitative microscopy data: History and challenges

PMCID: 4819578
PMID: 26906253
DOI: 10.3109/10409238.2016.1146222

[…] lls, which provides a simple, but very powerful and intuitive means by which to convey complex phenotypes (Keren et al., ; Pincus & Theriot, ). Furthermore, we have recently developed a method termed PhenoPlot that presents phenotypic data as graphical, and accurately scaled, representations in graphs which resemble actual cells () (Sailem et al., ). Each PhenoPlot can be used to display multiple […]

PhenoPlot institution(s)
Dynamical Cell Systems, Division of Cancer Biology, Institute of Cancer Research, London, UK
PhenoPlot funding source(s)
Supported by grants from the BBSRC (BB/J017183/1) and CRUK (C37275/A13478).

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