PhenoProphet specifications


Unique identifier OMICS_13788
Name PhenoProphet
Software type Package/Module
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux
License BSD 2-clause “Simplified” License
Computer skills Advanced
Version 0.1
Stability Beta
Maintained Yes



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  • person_outline Michael Brent <>

Publication for PhenoProphet

PhenoProphet in publication

PMCID: 4850258
PMID: 27094327
DOI: 10.1128/mBio.00313-16

[…] because its transcript abundance showed a significant negative correlation with capsule size across a range of capsule-inducing growth conditions () (see in the supplemental material). our phenoprophet algorithm also predicted that usv101 would be required for normal capsule regulation (). recently, jung et al also termed usv101 a core fungal transcription factor (tf), based […]

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PhenoProphet institution(s)
Center for Genome Sciences and Systems Biology, Washington University, Saint Louis, MO, USA; Department of Computer Science and Engineering, Washington University, Saint Louis, MO, USA; Department of Genetics, Washington University School of Medicine, Saint Louis, MO, USA
PhenoProphet funding source(s)
This work was supported by the National Institutes of Health (grants n°AI087794 and HG000045) and an Alexander and Gertrude Berg fellowship.

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