A predictor for identifying the lysine phosphoglycerylated sites in proteins. The benchmark dataset S was entirely derived from experiments. The peptides after deleting homology ones in the benchmark dataset were formulated into 14-D feature vectors and the predictor Phogly–PseAAC based on center nearest neighbor algorithm has shown excellent performance. Meanwhile an online webserver was developed for the predictor which would facilitate the use for the biologists.
Department of Information and Computer Science, University of Science and Technology, Beijing, China; Institute of Applied Mathematics, Academy of Mathematics and Systems Science, Chinese Academy of Sciences, Beijing, China; College of Science, China Agricultural University, Beijing, China
Phogly-PseAAC funding source(s)
This work is supported by the National Natural Science Foundation of China (Nos. 11301024, 11371365, 31201002, and 11131009).