phosphoGigolo statistics

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phosphoGigolo specifications

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Information

Unique identifier	OMICS_19550
Name	phosphoGigolo
Software type	Application/Script
Interface	Command line interface, Graphical user interface
Restrictions to use	None
Input data	A set pepXML formatted MS2 /MS3 level search results.
Input format	TSV
Operating system	Windows
Programming languages	C++
Computer skills	Advanced
Version	4.3.1
Stability	Stable
Maintained	Yes

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Maintainer

Andy Tao <>

Publication for phosphoGigolo

An integrated chemical, mass spectrometric and computational strategy for (quantitative) phosphoproteomics: application to Drosophila melanogaster Kc167 cells.

2007 Mol Biosyst

PMID: 17372656

DOI: 10.1039/b617545g

phosphoGigolo in publication

PhosphoPep—a phosphoproteome resource for systems biology research in Drosophila Kc167 cells

PMCID: 2063582

PMID: 17940529

DOI: 10.1038/msb4100182

[…] of a phosphopeptide, namely that the amino-acid sequence is identical but that the site of phosphorylation is different. after consolidation of the phosphopeptides using the computer program ‘phosphogigolo' (), we computed for a given dcn value the percentage of peptides that have the same amino-acid sequence (ignoring the phosphate group and the fact that a peptide can exist in two […]

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phosphoGigolo institution(s)

Institute of Molecular Systems Biology, ETH Zurich, Zurich, Switzerland; Institute for Systems Biology, Seattle, WA, USA; Faculty of Science, University of Zurich, Switzerland; Laboratoire Analyse et Modélisation pour la Biologie et l’Environnement (LAMBE), Evry, France; Department of Biochemistry, Purdue University, West Lafayette, IN, USA

phosphoGigolo funding source(s)

Supported by Purdue University, Federal funds from the National Heart, Lung, Blood Institute, National Institutes of Health, under contract No. N01-HV-28179, and by a fellowship from the Boehringer Ingelheim Fonds.

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