PhosphoSiteAnalyzer specifications


Unique identifier OMICS_05951
Name PhosphoSiteAnalyzer
Software type Package/Module
Interface Command line interface
Restrictions to use None
Input data A protein sequence, a phosphoSiteInformation file ((information about the position), an annotation file (same information as the phosphoSiteInformation file combined with a subset index column), an annotation/expression file (same information as the annotation file combined with a signal power column).
Input format FASTA, TXTOutput data: Figures and tables
Output format PDF, TXT
Operating system Unix/Linux
Programming languages C#
Computer skills Advanced
Version 1.4
Stability Stable
R, Adobe Reader, .Net
Maintained Yes




No version available

Publication for PhosphoSiteAnalyzer

PhosphoSiteAnalyzer institution(s)
Center for Experimental BioInformatics, Department of Biochemistry and Molecular Biology, University of Southern Denmark, Odense, Odense, Denmark; Department of Proteomics and Signal Transduction, Max-Planck-Institute of Biochemistry, Munich, Martinsried, Germany
PhosphoSiteAnalyzer funding source(s)
This work was supported by grants from the European Community’s Seventh Framework Program (FP7/2007-2013) under grant agreement no. HEALTH-F4-2007-200767 for the collaborative project APOSYS and HEALTH-F4-2008-201648 for the collaborative project PROSPECTS.

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