phydms specifications


Unique identifier OMICS_13094
Name phydms
Alternative name Phylogenetic analyses using Deep Mutational Scanning
Software type Package/Module
Interface Command line interface
Restrictions to use None
Input format FASTA, FATSQ, TXT
Output format TEX, LOG, TXT
Operating system Unix/Linux, Mac OS
Programming languages Python
License GNU General Public License version 3.0
Computer skills Advanced
Version 2.0.5
Stability Stable
Requirements Pip, Bio++
Maintained Yes



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  • person_outline J. D. Bloom <>

Publications for Phylogenetic analyses using Deep Mutational Scanning

phydms institution(s)
Division of Basic Sciences and Computational Biology Program, Fred Hutchinson Cancer Research Center, Seattle, WA, USA
phydms funding source(s)
This work was supported by the National Institute of General Medical Sciences of the National Institutes of Health (grant R01 GM102198).

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