PhylArray statistics

To access cutting-edge analytics on consensus tools, life science contexts and associated fields, you will need to subscribe to our premium service.

Subscribe
info

Citations per year

Citations chart
info

Popular tool citations

chevron_left Oligonucleotide design chevron_right
Popular tools chart
info

Tool usage distribution map

Tool usage distribution map
info

Associated diseases

Associated diseases

PhylArray specifications

Information


Unique identifier OMICS_07678
Name PhylArray
Interface Web user interface
Restrictions to use None
Programming languages Perl
Computer skills Basic
Stability Stable
Maintained Yes

Maintainer


  • person_outline Pierre Peyret <>

Publication for PhylArray

PhylArray in publications

 (3)
PMCID: 5870382
PMID: 29587880
DOI: 10.1186/s40168-018-0442-3

[…] to all 16s rrna gene diversity was constructed from the embl []. a set of 28- to 50-mer degenerate probes (additional file : table s2) was designed from these databases using kaspod [] and phylarray [] software that enable the determination of degenerate explorative capture probes. a minimal probe set composed of 15 probes has been selected so that probes are distributed […]

PMCID: 4889952
PMID: 27105841
DOI: 10.1093/nar/gkw309

[…] strongly depends on probe design, including variant-specific and explorative probes to provide comprehensive diversity. dedicated software has been developed to meet this specific need, such as phylarray (), metabolicdesign (), hispod () and kaspod (). therefore, hybridization capture for the exploration of metagenomic samples appears to be a particularly promising strategy with diverse […]

PMCID: 3224148
PMID: 21985453
DOI: 10.1186/1471-2105-12-394

[…] many computational methods exist to create microarray probe sets for conserved functional genes for microbial community analysis. these include such methods as hierarchical probe design, phylarray, hispod, and cassis [-]. these methods seek to design probes that are group- and/or sequence-specific. phylarray also designs degenerate and non-degenerate probes to within-group […]


To access a full list of publications, you will need to upgrade to our premium service.

PhylArray institution(s)
Clermont Université, Université d'Auvergne, Laboratoire Microorganismes: Génome et Environnement, Clermont-Ferrand, France

PhylArray reviews

star_border star_border star_border star_border star_border
star star star star star

Be the first to review PhylArray