Desktop app
Phylo-MCOA Phylo-MCOA

Phylo-MCOA

Explores the genomic tree space and detect outlier genes and species based on…

Explores the genomic tree space and detect outlier genes and species based on multiple co-inertia analysis (MCOA), which efficiently captures and compares the similarities in the phylogenetic…

Desktop app
Conclustador Conclustador

Conclustador

A congruence method that accommodates both very large numbers of genes and high…

A congruence method that accommodates both very large numbers of genes and high degrees of incongruence. Conclustador uses clustering algorithms to identify subsets of genes based on similarity of…

Desktop app
Clusterflock Clusterflock

Clusterflock

An open source tool that can be used to discover horizontally transferred…

An open source tool that can be used to discover horizontally transferred genes, recombining areas of chromosomes, and the phylogenetic 'core' of a genome. Though we use it in an…

Desktop app
Concaterpillar Concaterpillar

Concaterpillar

A hierarchical clustering method based on likelihood-ratio testing that…

A hierarchical clustering method based on likelihood-ratio testing that identifies congruent loci for phylogenomic analysis. Concaterpillar also includes a test for shared relative evolutionary rates…

Desktop app
TreeTracker TreeTracker

TreeTracker

Detects overrepresented clusters in a hierarchical tree. TreeTracker compares a…

Detects overrepresented clusters in a hierarchical tree. TreeTracker compares a hierarchical and a dichotomic non-hierarchical classification of elements, in order to find clusters in a hierarchical…

Desktop app
mILD Deprecated mILD

mILD

Automates the process of making pairwise comparisons between large numbers of…

Automates the process of making pairwise comparisons between large numbers of phylogenetic datasets using the incongruence length difference (ILD) test. The application also implements strategies for…

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