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PhyloPat

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Allows the complete Ensembl gene database to be queried using phylogenetic patterns. PhyloPat offers the possibility of querying with binary phylogenetic patterns or regular expressions, or through a phylogenetic tree of the 39 included species. Users can also input a list of Ensembl, EMBL, EntrezGene or HGNC IDs to check which phylogenetic lineage any gene belongs to.

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1 user review

Tim Hulsen's avatar image

Tim Hulsen

Very useful tool!

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PhyloPat classification

PhyloPat specifications

Restrictions to use:
None
Maintained:
Yes

PhyloPat support

Maintainer

  • Tim Hulsen <>

Credits

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Publications

Institution(s)

Computational Drug Discovery (CDD), CMBI, NCMLS, Radboud University Nijmegen Medical Centre, Nijmegen, Netherlands; Department of Molecular Design and Informatics, Schering-Plough, Netherlands

Funding source(s)

This work was part of BioRange SP3.2.2 project of the Netherlands Bioinformatics Centre (NBIC), and was supported financially by Schering-Plough corporation.

Link to literature

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