PhylOPDb specifications


Unique identifier OMICS_09183
Name PhylOPDb
Restrictions to use None
Maintained Yes


  • person_outline Pierre Peyret

Publication for PhylOPDb

PhylOPDb citation


Databases for Microbiologists

J Bacteriol
PMCID: 4505447
PMID: 26013493
DOI: 10.1128/JB.00330-15

[…] nce databases for bacteria, archaea, and eukaryota based on representative phylogenetic trees, and by the GREENGENES project (). To help monitor microbial communities within complex environments, the PhylOPDb database offers a large collection of regular and explorative rRNA-targeted probes (), and the rRNA operon copy number (rrnDB) database provides a means to interpret rRNA gene abundance in ba […]

PhylOPDb institution(s)
Clermont Université, Université d’Auvergne, EA 4678 CIDAM, Clermont-Ferrand, France; UMR CNRS 6158, ISIMA/LIMOS, Clermont Université, Université Blaise Pascal, Aubière, France; CNRS, UMR 6023, LMGE, Aubière, France; Clermont Université, CRRI, Aubière, France
PhylOPDb funding source(s)
Auvergne Regional Council, the European Regional Development Fund, the French ‘Direction Générale de l’Armement’ (DGA) and the program Investissements d'avenir AMI 2011 VALTEX

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